Metabolic Pathway Reconstruction of Fungal Genomes
This paper discusses the state-of-the-art of metabolic pathway reconstruction and highlights the outstanding issues. In particular, we consider a number of case studies using genomes of fungi relevant to industrial applications, such as biofuels, to demonstrate the performance of existing
techniques and illustrate the issues. Our case studies focus on the cells central metabolism, and the utilisation and transport of sugars as a carbon source, since these are essential concerns for industrial applications.
Keywords: Central Metabolism; Industrial Applications; Metabolic Pathways; Systems Biology
Document Type: Research Article
Affiliations: 1: School of Informatics and Applied Mathematics, Universiti Malaysia Terengganu, 21800, Malaysia 2: Department of Computer Science and Software Engineering, Concordia University, Montreal, 1455, Canada
Publication date: 01 April 2017
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