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178 articles with title/keywords/abstract containing protein ontology

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Pseudo Amino Acid Composition and its Applications in Bioinformatics, Proteomics and System Biology

Author: Chou, Kuo-Chen

Source: Current Proteomics, Volume 6, Number 4, December 2009 , pp. 262-274(13)

Publisher: Bentham Science Publishers

Shotgun proteomics approach to characterizing the embryonic proteome of the silkworm, Bombyx mori, at labrum appearance stage

Authors: Li, J-Y.; Chen, X.; Hosseini Moghaddam, S. H.; Chen, M.; Wei, H.; Zhong, B-X.

Source: Insect Molecular Biology, Volume 18, Number 5, October 2009 , pp. 649-660(12)

Publisher: Blackwell Publishing

A Database of Expressed Genes From Cochliomyia hominivorax (Diptera: Calliphoridae)

Authors: Guerrero, F. D.; Dowd, S. E.; Djikeng, A.; Wiley, G.; Macmil, S.; Saldivar, L.; Najar, F.; Roe, B. A.

Source: Journal of Medical Entomology, Volume 46, Number 5, September 2009 , pp. 1109-1116(8)

Publisher: Entomological Society of America

Exploration of homodimer receptor: homodimer protein interactions

Authors: Vera, Julio; Kwon, Taesoo; Schmitz, Ulf; Kolch, Walter; Wolkenhauer, Olaf

Source: International Journal of Bioinformatics Research and Applications, Volume 5, Number 4, 28 July 2009 , pp. 447-457(11)

Publisher: Inderscience Publishers

Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy

Authors: HANNEMANN, JAN; POORTER, HENDRIK; USADEL, BJÖRN; BLÄSING, OLIVER E.; FINCK, ALEX; TARDIEU, FRANCOIS; ATKIN, OWEN K.; PONS, THIJS; STITT, MARK; GIBON, YVES

Source: Plant, Cell & Environment, Volume 32, Number 9, September 2009 , pp. 1185-1200(16)

Publisher: Blackwell Publishing

Evaluation of genome-wide association study results through development of ontology fingerprints

Authors: Tsoi, Lam C.; Boehnke, Michael; Klein, Richard L.; Zheng, W. Jim

Source: Bioinformatics, Volume 25, Number 10, 15 May 2009 , pp. 1314-1320(7)

Publisher: Oxford University Press

Highly infiltrative brain tumours show reduced chemosensitivity associated with a stem cell-like phenotype

Authors: Johannessen, T.-C. A.; Wang, J.; Skaftnesmo, K.-O.; Sakariassen, P. Ø.; Enger, P. Ø.; Petersen, K.; Øyan, A. M.; Kalland, K.-H.; Bjerkvig, R.; Tysnes, B. B.

Source: Neuropathology & Applied Neurobiology, Volume 35, Number 4, August 2009 , pp. 380-393(14)

Publisher: Blackwell Publishing

Protein array technology to investigate cytokine production by monocytes from patients with advanced alcoholic cirrhosis: An ex vivo pilot study

Authors: Tazi, Khalid A.; Quioc, Jean-Jacques; Abdel-Razek, Wael; Tellier, Zéra; Guichard, Cécile; Ogier-Denis, Eric; Lebrec, Didier; Moreau, Richard

Source: Hepatology Research, Volume 39, Number 7, July 2009 , pp. 706-715(10)

Publisher: Blackwell Publishing

Transcriptional and functional defects of dendritic cells derived from the MUTZ-3 leukaemia line

Authors: Rasaiyaah, Jane; Noursadeghi, Mahdad; Kellam, Paul; Chain, Benjamin

Source: Immunology, Volume 127, Number 3, July 2009 , pp. 429-441(13)

Publisher: Blackwell Publishing

The use of gene ontology evidence codes in preventing classifier assessment bias

Authors: Rogers, Mark F.; Ben-Hur, Asa

Source: Bioinformatics, Volume 25, Number 9, 1 May 2009 , pp. 1173-1177(5)

Publisher: Oxford University Press

Molecular features of thyroid hormone-regulated skin remodeling in Xenopus laevis during metamorphosis

Authors: Suzuki, Ken-ichi; Machiyama, Fumiaki; Nishino, Shinsuke; Watanabe, Yusuke; Kashiwagi, Keiko; Kashiwagi, Akihiko; Yoshizato, Katsutoshi

Source: Development Growth & Differentiation, Volume 51, Number 4, May 2009 , pp. 411-427(17)

Publisher: Blackwell Publishing

Identification of prognosis-related proteins in advanced gastric cancer by mass spectrometry-based comparative proteomics

Authors: Jia, Shu-Qin; Niu, Zhao-Jian; Zhang, Lian-Hai; Zhong, Xi-Yao; Shi, Tao; Du, Hong; Zhang, Gui-Guo; Hu, Ying; Su, Xiu-Lan; Ji, Jia-Fu

Source: Journal of Cancer Research and Clinical Oncology, Volume 135, Number 3, March 2009 , pp. 403-411(9)

Publisher: Springer

Development and functional annotation of an 11,303-EST collection from Eucalyptus for studies of cold tolerance

Authors: Keller, Guylaine; Marchal, Thibault; SanClemente, Hélène; Navarro, Marie; Ladouce, Nathalie; Wincker, Patrick; Couloux, Arnaud; Teulières, Chantal; Marque, Christiane

Source: Tree Genetics & Genomes, Volume 5, Number 2, April 2009 , pp. 317-327(11)

Publisher: Springer

Allergen Atlas: a comprehensive knowledge center and analysis resource for allergen information

Authors: Tong, Joo Chuan; Lim, Shen Jean; Muh, Hon Cheng; Chew, Fook Tim; Tammi, Martti T.

Source: Bioinformatics, Volume 25, Number 7, 1 April 2009 , pp. 979-980(2)

Publisher: Oxford University Press

Gene expression trends and protein features effectively complement each other in gene function prediction

Authors: Wabnik, Krzysztof; Hvidsten, Torgeir R.; Kedzierska, Anna; Van Leene, Jelle; De Jaeger, Geert; Beemster, Gerrit T. S.; Komorowski, Jan; Kuiper, Martin T. R.

Source: Bioinformatics, Volume 25, Number 3, 1 February 2009 , pp. 322-330(9)

Publisher: Oxford University Press

SciMiner: web-based literature mining tool for target identification and functional enrichment analysis

Authors: Hur, Junguk; Schuyler, Adam D.; States, David J.; Feldman, Eva L.

Source: Bioinformatics, Volume 25, Number 6, 15 March 2009 , pp. 838-840(3)

Publisher: Oxford University Press

KEPE—a motif frequently superimposed on sumoylation sites in metazoan chromatin proteins and transcription factors

Authors: Diella, Francesca; Chabanis, Sophie; Luck, Katja; Chica, Claudia; Ramu, Chenna; Nerlov, Claus; Gibson, Toby J.

Source: Bioinformatics, Volume 25, Number 1, 1 January 2009 , pp. 1-5(5)

Publisher: Oxford University Press

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