Search Results

High-resolution, high-throughput HLA genotyping by next-generation sequencing

Authors: Bentley, G.; Higuchi, R.; Hoglund, B.; Goodridge, D.; Sayer, D.; Trachtenberg, E. A.; Erlich, H. A.

Source: Tissue Antigens, Volume 74, Number 5, November 2009 , pp. 393-403(11)

Publisher: Blackwell Publishing

Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest

Authors: Öpik, M.; Metsis, M.; Daniell, T. J.; Zobel, M.; Moora, M.

Source: New Phytologist, Volume 184, Number 2, October 2009 , pp. 424-437(14)

Publisher: Blackwell Publishing

Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperate Quercus macrocarpa phyllosphere

Authors: Jumpponen, A.; Jones, K. L.

Source: New Phytologist, Volume 184, Number 2, October 2009 , pp. 438-448(11)

Publisher: Blackwell Publishing

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

Authors: Buée, M.; Reich, M.; Murat, C.; Morin, E.; Nilsson, R. H.; Uroz, S.; Martin, F.

Source: New Phytologist, Volume 184, Number 2, October 2009 , pp. 449-456(8)

Publisher: Blackwell Publishing

Sim4cc: a cross-species spliced alignment program

Authors: Zhou, Leming; Pertea, Mihaela; Delcher, Arthur L.; Florea, Liliana

Source: Nucleic Acids Research, Volume 37, Number 11, 20 June 2009 , pp. e80-e80(1)

Publisher: Oxford University Press

A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley

Authors: Wicker, Thomas; Taudien, Stefan; Houben, Andreas; Keller, Beat; Graner, Andreas; Platzer, Matthias; Stein, Nils

Source: The Plant Journal, Volume 59, Number 5, September 2009 , pp. 712-722(11)

Publisher: Blackwell Publishing

Frameshift detection in prokaryotic genomic sequences

Authors: Kislyuk, Andrey; Lomsadze, Alexandre; Lapidus, Alla L.; Borodovsky, Mark

Source: International Journal of Bioinformatics Research and Applications, Volume 5, Number 4, 28 July 2009 , pp. 458-477(20)

Publisher: Inderscience Publishers

Flow cytometry for enrichment and titration in massively parallel DNA sequencing

Authors: Sandberg, Julia; Ståhl, Patrik L.; Ahmadian, Afshin; Bjursell, Magnus K.; Lundeberg, Joakim

Source: Nucleic Acids Research, Volume 37, Number 8, 30 May 2009 , pp. e63-e63(1)

Publisher: Oxford University Press

The mitochondrial genome sequence of the arbuscular mycorrhizal fungus Glomus intraradices isolate 494 and implications for the phylogenetic placement of Glomus

Authors: Lee, Jaikoo; Young, J. Peter W.

Source: New Phytologist, Volume 183, Number 1, July 2009 , pp. 200-211(12)

Publisher: Blackwell Publishing

Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing

Authors: Bundock, Peter C.; Eliott, Frances G.; Ablett, Gary; Benson, Adam D.; Casu, Rosanne E.; Aitken, Karen S.; Henry, Robert J.

Source: Plant Biotechnology Journal, Volume 7, Number 4, May 2009 , pp. 347-354(8)

Publisher: Blackwell Publishing

Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces

Authors: DEAGLE, BRUCE E.; KIRKWOOD, ROGER; JARMAN, SIMON N.

Source: Molecular Ecology, Volume 18, Number 9, May 2009 , pp. 2022-2038(17)

Publisher: Blackwell Publishing

Coastal Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity

Authors: Palenik, B.; Ren, Q.; Tai, V.; Paulsen, I. T.

Source: Environmental Microbiology, Volume 11, Number 2, February 2009 , pp. 349-359(11)

Publisher: Blackwell Publishing

The deep evolution of metazoan microRNAs

Authors: Wheeler, Benjamin M.; Heimberg, Alysha M.; Moy, Vanessa N.; Sperling, Erik A.; Holstein, Thomas W.; Heber, Steffen; Peterson, Kevin J.

Source: Evolution & Development, Volume 11, Number 1, January/February 2009 , pp. 50-68(19)

Publisher: Blackwell Publishing

Aggressive assembly of pyrosequencing reads with mates

Authors: Miller, Jason R.; Delcher, Arthur L.; Koren, Sergey; Venter, Eli; Walenz, Brian P.; Brownley, Anushka; Johnson, Justin; Li, Kelvin; Mobarry, Clark; Sutton, Granger

Source: Bioinformatics, Volume 24, Number 24, 15 December 2008 , pp. 2818-2824(7)

Publisher: Oxford University Press

Comprehensive resequence analysis of a 136 kb region of human chromosome 8q24 associated with prostate and colon cancers

Authors: Yeager, Meredith; Xiao, Nianqing; Hayes, Richard; Bouffard, Pascal; Desany, Brian; Burdett, Laura; Orr, Nick; Matthews, Casey; Qi, Liqun; Crenshaw, Andrew; Markovic, Zdenek; Fredrikson, Karin; Jacobs, Kevin; Amundadottir, Laufey; Jarvie, Thomas; Hunter, David; Hoover, Robert; Thomas, Gilles; Harkins, Timothy; Chanock, Stephen

Source: Human Genetics, Volume 124, Number 2, September 2008 , pp. 161-170(10)

Publisher: Springer

Brazilian Genome Sequencing Projects: State of the Art

Authors: Capanema Xavier, Eduardo R.; Xavier Capanema, Beatriz P.a.r.r.e.i.r.a.l.; Ruiz, Jeronimo C.o.n.c.e.i.c.a.o.; Oliveira, Guilherme; Meyer, Roberto; D'Afonseca, Vivian; Miyoshi, Anderson; Azevedo, Vasco

Source: Recent Patents on DNA & Gene Sequences, Volume 2, Number 2, June 2008 , pp. 111-132(22)

Publisher: Bentham Science Publishers

Genomic DNA sequence comparison between two inbred soybean cyst nematode biotypes facilitated by massively parallel 454 micro-bead sequencing

Authors: Bekal, Sadia; Craig, J.; Hudson, M.; Niblack, T.; Domier, L.; Lambert, K.

Source: Molecular Genetics and Genomics, Volume 279, Number 5, May 2008 , pp. 535-543(9)

Publisher: Springer

Sequencing goes 454 and takes large-scale genomics into the wild

Author: ELLEGREN, HANS

Source: Molecular Ecology, Volume 17, Number 7, April 2008 , pp. 1629-1631(3)

Publisher: Blackwell Publishing

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

Authors: VERA, J. CRISTOBAL; WHEAT, CHRISTOPHER W.; FESCEMYER, HOWARD W.; FRILANDER, MIKKO J.; CRAWFORD, DOUGLAS L.; HANSKI, ILKKA; MARDEN, JAMES H.

Source: Molecular Ecology, Volume 17, Number 7, April 2008 , pp. 1636-1647(12)

Publisher: Blackwell Publishing

Sequencing breakthroughs for genomic ecology and evolutionary biology

Author: HUDSON, MATTHEW E.

Source: Molecular Ecology Notes, Volume 8, Number 1, January 2008 , pp. 3-17(15)

Publisher: Blackwell Publishing