Free Energy Simulations Over Creation/Annihilation Paths for a Flexible Solute
Author: Mezei M.1
Source: Molecular Simulation, Volume 28, Number 1, 1 January 2002 , pp. 39-44(6)
Publisher: Taylor and Francis Ltd
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Abstract:
The inclusion of molecular flexibility into free energy simulations over creation/annihilation paths has been analyzed. A new formalism is presented for such simulations with the intramolecular degrees of freedom being active during the simulation and a recently introduced path is reviewed that allows the inclusion of the flexibility using separate simulations.Keywords: Free energy simulation; Flexible solute; Creation/annihilation path; Scaled constraint method
Document Type: Research article
Affiliations: 1: Department of Physiology and Biophysics, Mount Sinai School of Medicine, NYU, New York, NY 10029, USA
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