Nucleic Acids Research

Article
RNase T1 mediated base-specific cleavage and MALDI-TOF MS for high-throughput comparative sequence analysis
pp. e47-e47(1)
Authors: Boecker S.; Rodi C.P.; Hillenkamp F.; Jurinke C.; van den Boom D.; Hartmer R.; Storm N.

Article
Manual 768 or 384 well microplate gel ‘dry’ electrophoresis for PCR checking and SNP genotyping
pp. e48-e48(1)
Authors: Rassoulian H.; Gaunt T.R.; Hinks L.J.; Day I.N.M.

Article
On the normalization of RNA equilibrium free energy to the length of the sequence
pp. e49-e49(1)
Authors: Pervouchine D.D.; Graber J.H.; Kasif S.

Article
Analysis and accurate quantification of CpG methylation by MALDI mass spectrometry
pp. e50-e50(1)
Authors: Schatz P.; Schuster M.; Berlin K.; Tost J.; Gut I.G.

Article
DNA modification and functional delivery into human cells using Escherichia coli DH10B
pp. e51-e51(1)
Authors: Narayanan K.; Warburton P.E.

Article
Testing for differentially expressed genes with microarray data
pp. e52-e52(1)
Authors: Tsai C-A.; Chen Y-J.; Chen J.J.

Article
A new strategy to amplify degraded RNA from small tissue samples for microarray studies
pp. e53-e53(1)
Authors: Inman J.M.; Kozhich O.A.; Xiang C.C.; Chen M.; Ma L.; Phan Q.N.; Brownstein M.J.

Article
RNA helicase A interacts with dsDNA and topoisomerase II
pp. 2253-2260(8)
Authors: Zhou K.; Choe K-T.; Zaidi Z.; Wang Q.; Mathews M.B.; Lee C-G.

Article
The versatile thymine DNA-glycosylase: a comparative characterization of the human, Drosophila and fission yeast orthologs
pp. 2261-2271(11)
Authors: Hardeland U.; Bentele M.; Jiricny J.; Schär P.

Article
A candidate prostate cancer susceptibility gene encodes tRNA 3 processing endoribonuclease
pp. 2272-2278(7)
Authors: Takaku H.; Minagawa A.; Takagi M.; Nashimoto M.

Article
Molecular determinants of the cell-cycle regulated Mcm1p–Fkh2p transcription factor complex
pp. 2279-2288(10)
Authors: Boros J.; Lim F-L.; Darieva Z.; Pic-Taylor A.; Harman R.; Morgan B.A.; Sharrocks A.D.

Article
Identification of stop codon readthrough genes in Saccharomyces cerevisiae
pp. 2289-2296(8)
Authors: Duchateau-Nguyen G.; Hermann-Le Denmat S.; Termier M.; Namy O.; Hatin I.; Rousset J-P.

Article
CpG oligodeoxynucleotide 5mer-induced apoptosis in MOLT-4 leukaemia cells does not require caspase 3 or new protein synthesis
pp. 2297-2304(8)
Authors: Tidd D.M.; Broughton C.M.; Clark R.E.

Article
The DNA methyltransferases associate with HP1 and the SUV39H1 histone methyltransferase
pp. 2305-2312(8)
Authors: Fuks F.; Hurd P.J.; Deplus R.; Kouzarides T.

Article
The DNA-bending protein HMGB1 is a cellular cofactor of Sleeping Beauty transposition
pp. 2313-2322(10)
Authors: Zayed H.; Izsvák Z.; Khare D.; Heinemann U.; Ivics Z.

Article
Steady-state and time-resolved fluorescence studies indicate an unusual conformation of 2-aminopurine within ATAT and TATA duplex DNA sequences
pp. 2323-2332(10)
Authors: Thompson E.; Millar D.P.; Linn S.; Rai P.; Cole T.D.

Article
Dependence of pre-mRNA introns on PRP17, a non-essential splicing factor: implications for efficient progression through cell cycle transitions
pp. 2333-2343(11)
Authors: Surana U.; Chawla G.; Sapra A.K.; Vijayraghavan U.

Article
Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies
pp. 2344-2352(9)
Authors: Domitrovich A.M.; Kunkel G.R.

Article
The enigmatic mitochondrial ORF ymf39 codes for ATP synthase chain b
pp. 2353-2360(8)
Authors: Burger G.; Lang B.F.; Braun H-P.; Marx S.

Article
Sequence and structure of the extrachromosomal palindrome encoding the ribosomal RNA genes in Dictyostelium
pp. 2361-2368(8)
Authors: Kuspa A.; Sucgang R.; Chen G.; Liu W.; Lindsay R.; Lu J.; Muzny D.; Shaulsky G.; Loomis W.; Gibbs R.

Article
HMG box transcription factor TCF-4’s interaction with CtBP1 controls the expression of the Wnt target Axin2/Conductin in human embryonic kidney cells
pp. 2369-2380(12)
Authors: Valenta T.; Lukas J.; Korinek V.

Article
RNA structure-dependent uncoupling of substrate recognition and cleavage by Escherichia coli ribonuclease III
pp. 2381-2392(12)
Authors: Calin-Jageman I.; Nicholson A.W.

Article
Divergent synthetic nucleotide motif recognition pattern: design and development of potent immunomodulatory oligodeoxyribonucleotide agents with distinct cytokine induction profiles
pp. 2393-2400(8)
Authors: Huang P.; Zhang R.; Wang H.; Kandimalla E.R.; Bhagat L.; Wang D.; Yu D.; Zhu F-G.; Tang J.; Agrawal S.

Article
Similar behaviour of single-strand and double-strand siRNAs suggests they act through a common RNAi pathway
pp. 2401-2407(7)
Authors: Holen T.; Amarzguioui M.; Babaie E.; Prydz H.

Article
Assembly and isolation of intermediate steps of transcription complexes formed on the human 5S rRNA gene
pp. 2408-2416(9)
Authors: Weser S.; Riemann J.; Seifart K.H.; Meissner W.

Article
RNA editing in hornwort chloroplasts makes more than half the genes functional
pp. 2417-2423(7)
Authors: Kugita M.; Yamamoto Y.; Fujikawa T.; Matsumoto T.; Yoshinaga K.

Article
Identification and characterization of transcription factor IIIA and ribosomal protein L5 from Arabidopsis thaliana
pp. 2424-2433(10)
Authors: Yukawa Y.; Sugiura M.; Mathieu O.; Prieto J-L.; Vaillant I.; Tourmente S.

Article
Structural elements in the internal ribosome entry site of Plautia stali intestine virus responsible for binding with ribosomes
pp. 2434-2442(9)
Authors: Yamamoto H.; Hachimori A.; Uchiumi T.; Nishiyama T.; Shibuya N.; Hatakeyama Y.; Nakashima N.

Article
Topological structure analysis of the protein–protein interaction network in budding yeast
pp. 2443-2450(8)
Authors: Zhang N.; Bu D.; Li G.; Zhao Y.; Chen R.; Cai L.; Xue H.; Zhu X.; Lu H.; Zhang J.; Sun S.; Ling L.

Article
Stimulation of human DNA polymerase by MDM2
pp. 2451-2459(9)
Authors: Haines D.S.; Vlatkovic N.; Boyd M.T.; Asahara H.; Li Y.; Fuss J.; Linn S.