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Molecular Biology and Evolution publishes research at the interface between molecular and evolutionary biology. The journal publishes investigations of molecular evolutionary patterns and processes, tests of evolutionary hypotheses that use molecular data, and studies that use molecular evolutionary information to address questions about biological function at all levels of organization.

Publisher: Oxford University Press

Volume 26, Number 2, 25 February 2009
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Accommodating the Effect of Ancient DNA Damage on Inferences of Demographic Histories
pp. 245-248(4)
Authors: Rambaut, Andrew; Ho, Simon Y.W.; Drummond, Alexei J.; Shapiro, Beth

Unexpected Dynamic Gene Family Evolution in Algal Actins
pp. 249-253(5)
Authors: Wu, Min; Comeron, Josep M.; Yoon, Hwan Su; Bhattacharya, Debashish

Investigating Protein-Coding Sequence Evolution with Probabilistic Codon Substitution Models
pp. 255-271(17)
Authors: Anisimova, Maria; Kosiol, Carolin

An Investigation of the Statistical Power of Neutrality Tests Based on Comparative and Population Genetic Data
pp. 273-283(11)
Authors: Zhai, Weiwei; Nielsen, Rasmus; Slatkin, Montgomery

The Multiple Evolutionary Histories of Dioxygen Reductases: Implications for the Origin and Evolution of Aerobic Respiration
pp. 285-297(13)
Authors: Brochier-Armanet, Celine; Talla, Emmanuel; Gribaldo, Simonetta

Molecular Characterization of Visual Pigments in Branchiopoda and the Evolution of Opsins in Arthropoda
pp. 299-311(13)
Authors: Kashiyama, Kazuyuki; Seki, Takaharu; Numata, Hideharu; Goto, Shin G.

Toward Resolving Deep Neoaves Phylogeny: Data, Signal Enhancement, and Priors
pp. 313-326(14)
Authors: Pratt, Renae C.; Gibb, Gillian C.; Morgan-Richards, Mary; Phillips, Matthew J.; Hendy, Michael D.; Penny, David

Using Alu Elements as Polyadenylation Sites: A Case of Retroposon Exaptation
pp. 327-334(8)
Authors: Chen, Chongjian; Ara, Takeshi; Gautheret, Daniel

A Major Clade of Prokaryotes with Ancient Adaptations to Life on Land
pp. 335-343(9)
Authors: Battistuzzi, Fabia U.; Hedges, S. Blair

The Temporal Dynamics of Slightly Deleterious Mutations in Escherichia coli and Shigella spp.
pp. 345-355(11)
Authors: Balbi, Kevin J.; Rocha, Eduardo P.C.; Feil, Edward J.

Evolution of C4 Phosphoenolpyruvate Carboxykinase in Grasses, from Genotype to Phenotype
pp. 357-365(9)
Authors: Christin, Pascal-Antoine; Petitpierre, Blaise; Salamin, Nicolas; Bchi, Lucie; Besnard, Guillaume

An Ancient Horizontal Gene Transfer between Mosquito and the Endosymbiotic Bacterium Wolbachia pipientis
pp. 367-374(8)
Authors: Woolfit, Megan; Iturbe-Ormaetxe, Iaki; McGraw, Elizabeth A.; O'Neill, Scott L.

Degenerate Tetraploidy Was Established Before Bdelloid Rotifer Families Diverged
pp. 375-383(9)
Authors: Hur, Jae H.; Van Doninck, Karine; Mandigo, Morgan L.; Meselson, Matthew

Rapid Evolution and the Importance of Recombination to the Gastroenteric Pathogen Campylobacter jejuni
pp. 385-397(13)
Authors: Wilson, Daniel J.; Gabriel, Edith; Leatherbarrow, Andrew J.H.; Cheesbrough, John; Gee, Steven; Bolton, Eric; Fox, Andrew; Hart, C. Anthony; Diggle, Peter J.; Fearnhead, Paul

NAD Biosynthesis Evolution in Bacteria: Lateral Gene Transfer of Kynurenine Pathway in Xanthomonadales and Flavobacteriales
pp. 399-406(8)
Authors: Lima, Wanessa C.; Varani, Alessandro M.; Menck, Carlos F.M.

Origin of the Genetic Components of the Vomeronasal System in the Common Ancestor of all Extant Vertebrates
pp. 407-419(13)
Authors: Grus, Wendy E.; Zhang, Jianzhi

Genetic Diversity in the Paramecium aurelia Species Complex
pp. 421-431(11)
Authors: Catania, Francesco; Wurmser, Franois; Potekhin, Alexey A.; Przybo, Ewa; Lynch, Michael

Altered trans-Regulatory Control of Gene Expression in Multiple Anthocyanin Genes Contributes to Adaptive Flower Color Evolution in Mimulus aurantiacus
pp. 433-444(12)
Authors: Streisfeld, Matthew A.; Rausher, Mark D.

No Rosetta Stone for a SenseAntisense Origin of Aminoacyl tRNA Synthetase Classes
pp. 445-450(6)
Authors: Williams, Tom A.; Wolfe, Kenneth H.; Fares, Mario A.

Estimating Translational Selection in Eukaryotic Genomes
pp. 451-461(11)
Authors: dos Reis, Mario; Wernisch, Lorenz

Gnathostome Phylogenomics Utilizing Lungfish EST Sequences
pp. 463-471(9)
Authors: Hallstrm, Bjrn M.; Janke, Axel

Problems and Solutions for Estimating Indel Rates and Length Distributions
pp. 473-480(8)
Author: Cartwright, Reed A.

Ancestral Sequence Reconstruction in Primate Mitochondrial DNA: Compositional Bias and Effect on Functional Inference
pp. 481-481(1)

Editor's Report for 2008
pp. 483-484(2)
Author: Uyenoyama, Marcy K.

Society for Molecular Biology and Evolution (SMBE) Council and Business Meetings, 2008, Barcelona, Spain
pp. 485-486(2)

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