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Molecular Biology and Evolution publishes research at the interface between molecular and evolutionary biology. The journal publishes investigations of molecular evolutionary patterns and processes, tests of evolutionary hypotheses that use molecular data, and studies that use molecular evolutionary information to address questions about biological function at all levels of organization.

Publisher: Oxford University Press

Volume 23, Number 9, 15 September 2006
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Positive Selection Versus Demography: Evolutionary Inferences Based on an Unusual Haplotype Structure in Drosophila simulans
pp. 1643-1647(5)
Authors: Quesada, Humberto; Ramos-Onsins, Sebastián E.; Rozas, Julio; Aguadé, Montserrat

Evidence that the Root of the Tree of Life Is Not within the Archaea
pp. 1648-1651(4)
Authors: Skophammer, Ryan G.; Herbold, Craig W.; Rivera, Maria C.; Servin, Jacqueline A.; Lake, James A.

Amino Acid Cost and Codon-Usage Biases in 6 Prokaryotic Genomes: A Whole-Genome Analysis
pp. 1670-1680(11)
Authors: Heizer, Esley M.; Raiford, Douglas W.; Raymer, Michael L.; Doom, Travis E.; Miller, Robert V.; Krane, Dan E.

Genome Architecture Drives Protein Evolution in Ciliates
pp. 1681-1687(7)
Authors: Zufall, Rebecca A.; McGrath, Casey L.; Muse, Spencer V.; Katz, Laura A.

A Scan for Signatures of Positive Selection in Candidate Loci for Skin Pigmentation in Humans
pp. 1697-1706(10)
Authors: Izagirre, Neskuts; García, Iker; Junquera, Corina; de la Rúa, Concepción; Alonso, Santos

Evolutionary Origin and Maintenance of Coexpressed Gene Clusters in Mammals
pp. 1715-1723(9)
Authors: Sémon, Marie; Duret, Laurent

Free Content A Phylogenetic Method for Detecting Positive Epistasis in Gene Sequences and Its Application to RNA Virus Evolution
pp. 1724-1730(7)
Authors: Shapiro, Beth; Rambaut, Andrew; Pybus, Oliver G.; Holmes, Edward C.

Free Content The Transition to Self-Compatibility in Arabidopsis thaliana and Evolution within S-Haplotypes over 10 Myr
pp. 1741-1750(10)
Authors: Bechsgaard, Jesper S.; Castric, Vincent; Vekemans, Xavier; Schierup, Mikkel H.

Structural Determinants of the Rate of Protein Evolution in Yeast
pp. 1751-1761(11)
Authors: Bloom, Jesse D.; Drummond, D. Allan; Arnold, Frances H.; Wilke, Claus O.

Assessing Site-Interdependent Phylogenetic Models of Sequence Evolution
pp. 1762-1775(14)
Authors: Rodrigue, Nicolas; Philippe, Hervé; Lartillot, Nicolas

Sheep Mitochondrial DNA Variation in European, Caucasian, and Central Asian Areas
pp. 1776-1783(8)
Authors: Tapio, Miika; Marzanov, Nurbiy; Ozerov, Mikhail; Ćinkulov, Mirjana; Gonzarenko, Galina; Kiselyova, Tatyana; Murawski, Maciej; Viinalass, Haldja; Kantanen, Juha

Reconstructing the Evolutionary History of Polyploids from Multilabeled Trees
pp. 1784-1791(8)
Authors: Huber, Katharina T.; Oxelman, Bengt; Lott, Martin; Moulton, Vincent

Phylum-Wide Analysis of SSU rDNA Reveals Deep Phylogenetic Relationships among Nematodes and Accelerated Evolution toward Crown Clades
pp. 1792-1800(9)
Authors: Holterman, Martijn; van der Wurff, Andre; Bongers, Tom; Holovachov, Oleksandr; Bakker, Jaap; Helder, Johannes

Tracking down Human Contamination in Ancient Human Teeth
pp. 1801-1807(7)
Authors: Sampietro, María Lourdes; Gilbert, M. Thomas P.; Lao, Oscar; Caramelli, David; Lari, Martina; Bertranpetit, Jaume; Lalueza-Fox, Carles

Free Content Gene Loss and Evolutionary Rates Following Whole-Genome Duplication in Teleost Fishes
pp. 1808-1816(9)
Authors: Brunet, Frédéric G.; Crollius, Hugues Roest; Paris, Mathilde; Aury, Jean-Marc; Gibert, Patricia; Jaillon, Olivier; Laudet, Vincent; Robinson-Rechavi, Marc

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