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Molecular Biology and Evolution publishes research at the interface between molecular and evolutionary biology. The journal publishes investigations of molecular evolutionary patterns and processes, tests of evolutionary hypotheses that use molecular data, and studies that use molecular evolutionary information to address questions about biological function at all levels of organization.

Publisher: Oxford University Press

Volume 21, Number 12, 15 December 2004
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Evolutionary Pressures on Apicoplast Transit Peptides
pp. 2183-2194(12)
Authors: Ralph, Stuart A.; Foth, Bernardo J.; Hall, Neil; McFadden, Geoffrey I.

The Control of Copy Number of IS6110 in Mycobacterium tuberculosis
pp. 2195-2201(7)
Authors: Tanaka, Mark M.; Rosenberg, Noah A.; Small, Peter M.

Nonneutral Evolution of the Transcribed Pseudogene Makorin1-p1 in Mice
pp. 2202-2209(8)
Authors: Podlaha, Ondrej; Zhang, Jianzhi

Evolution of Vertebrate Genes Related to Prion and Shadoo Proteins—Clues from Comparative Genomic Analysis
pp. 2210-2231(22)
Authors: Premzl, Marko; Gready, Jill E.; Jermiin, Lars S.; Simonic, Tatjana; Marshall Graves, Jennifer A.

The Evolutionary Implications of knox-I Gene Duplications in Conifers: Correlated Evidence from Phylogeny, Gene Mapping, and Analysis of Functional Divergence
pp. 2232-2245(14)
Authors: Guillet-Claude, Carine; Isabel, Nathalie; Pelgas, Betty; Bousquet, Jean

Decreases in Activation Energy and Substrate Affinity in Cold-Adapted A4-Lactate Dehydrogenase: Evidence from the Antarctic Notothenioid Fish Chaenocephalus aceratus
pp. 2246-2255(10)
Authors: Fields, Peter A.; Houseman, Daniel E.

Duplication and Diversifying Selection Among Termite Antifungal Peptides
pp. 2256-2264(9)
Authors: Bulmer, Mark S.; Crozier, Ross H.

Different Matrilineal Contributions to Genetic Structure of Ethnic Groups in the Silk Road Region in China
pp. 2265-2280(16)
Authors: Yao, Yong-Gang; Kong, Qing-Peng; Zhu, Chun-Ling; Zhang, Ya-Ping

Selective Expansion of the Newly Evolved Genomic Variants of Retrotransposon 1731 in the Drosophila Genomes
pp. 2281-2289(9)
Authors: Kalmykova, A. I.; Kwon, D. A.; Rozovsky, Ya. M.; Hueber, N.; Capy, P.; Maisonhaute, C.; Gvozdev, V. A.

Comparison of Three Methods for Estimating Rates of Synonymous and Nonsynonymous Nucleotide Substitutions
pp. 2290-2298(9)
Authors: Tzeng, Yun-Huei; Pan, Runsun; Li, Wen-Hsiung

Phylogenetic Assessment of Introns and SINEs Within the Y Chromosome Using the Cat Family Felidae As a Species Tree
pp. 2299-2309(11)
Authors: Pecon-Slattery, J.; Pearks Wilkerson, A. J.; Murphy, W. J.; O'Brien, S. J.

Different Regulatory Mechanisms Underlie Similar Transposable Element Profiles in Pufferfish and Fruitflies
pp. 2310-2318(9)
Authors: Neafsey, Daniel E.; Blumenstiel, Justin P.; Hartl, Daniel L.

A Broad Survey of Recombination in Animal Mitochondria
pp. 2319-2325(7)
Authors: Piganeau, Gwenaël; Gardner, Michael; Eyre-Walker, Adam

Adaptive Evolution Drives the Diversification of Zinc-Finger Binding Domains
pp. 2326-2339(14)
Authors: Schmidt, Deena; Durrett, Rick

Evolution of the RNA Polymerase Bprime Subunit Gene (rpoBprime) in Halobacteriales: a Complementary Molecular Marker to the SSU rRNA Gene
pp. 2340-2351(12)
Authors: Walsh, David A.; Bapteste, Eric; Kamekura, Masahiro; Doolittle, W. Ford

Three-Dimensional Window Analysis for Detecting Positive Selection at Structural Regions of Proteins
pp. 2352-2359(8)
Author: Suzuki, Yoshiyuki

Editor's Report for 2003 and January to June, 2004
pp. 2360-2363(4)
Author: Martin, William

Society for Molecular Biology and Evolution (SMBE) Council and Business Meetings, 2004 State College, Pennsylvania, USA
pp. 2364-2365(2)

Treasurer's Report for January 1, 2003–December 31, 2004 prepared by Marta L. Wayne, Treasurer
pp. 2366-2366(1)

MBE Reviewers
pp. 2367-2373(7)

Origins, Lineage-Specific Expansions, and Multiple Losses of Tyrosine Kinases in Eukaryotes
pp. 2374-2375(2)
Authors: Shiu, Shin-Han; Li, Wen-Hsiung

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