Fragile X CGG repeat structures among African-Americans: identification of a novel factor responsible for repeat instability

Authors: Crawford, Dana C.1; Zhang, Fuping2; Wilson, Beth1; Warren, Stephen T.1; Sherman, StephanieL.1

Source: Human Molecular Genetics, Volume 9, Number 12, 22 July 2000 , pp. 1759-1769(11)

Publisher: Oxford University Press

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Abstract:

The cryptic CGG repeat responsible for the fragile X syndrome, located in the 5-UTR of FMR1, is unique compared with the many other triplet repeat-causing diseases, making it ideal for identifying factors involved in repeat expansion that may be common to other triplet repeat diseases. To date, a number of factors have been identified which may influence repeat instability, including the number and position of interspersed AGGs, length of the 3 pure CGG repeat and haplotype background. However, nearly all such data were derived from studies of Caucasians. Using a large African-American population, we present the only comprehensive examination of factors associated with CGG repeat instability in a non-Caucasian population. Among Caucasians, susceptible alleles were thought to come from those in the intermediate repeat range (41-60 repeats); however, we find that susceptible alleles may come from a larger repeat pool (35-60 repeats) and are better defined by their pure CGG repeat and/or ­presence of only one AGG interruption. These results demonstrate the existence of different susceptible alleles among world populations and may account for the similar prevalence of the fragile X syndrome in African-Americans compared with Caucasians despite the lower frequency of inter­mediate sized alleles in the African-American population. Finally, we show that repeat structures among unaffected African-Americans with the most frequent fragile X haplotype background are either pure or contain a single distal interruption. We propose that the lack of a proximal most interruption is a novel factor involved in CGG repeat instability.

Document Type: Research article

Affiliations: 1: Genetics, 2: Biochemistry and

Publication date: 2000-07-22

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  • Human Molecular Genetics concentrates on full-length research papers covering a wide range of topics in all aspects of human molecular genetics.
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