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Free Content The nonlocal model of porewater irrigation: Limits to its equivalence with a cylinder diffusion model

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Burrows maintained by animals in aquatic sediments ventilate the sediment and can substantially alter the rates and pathways of biologically-mediated decomposition reactions. A well known and effective way of modeling the impact of such bioirrigation in sediment diagenetic models is to assume that solutes diffuse into an annulus of sediment surrounding the burrow; the reaction diffusion equations are represented in cylindrical polar co-ordinates. More commonly, bioirrigation of sediments is represented by one-dimensional "nonlocal" irrigation models. Their use is typically justified by the assertion that a nonlocal model is equivalent to a radially-integrated two-dimensional diffusion model in cylindrical-polar co-ordinates. In this paper we highlight limits to this equivalence, drawing on examples from both single-species and multiple-species reaction diffusion models. A modified derivation of the nonlocal model using a higher order Taylor series approximation was tested but found to provide little improvement over the original model. We suggest some approaches for choosing nonlocal coefficients and identify particular limitations to be alert to when applying the nonlocal model.

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Document Type: Research Article

Publication date: 2005-03-01

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  • The Journal of Marine Research publishes peer-reviewed research articles covering a broad array of topics in physical, biological and chemical oceanography. Articles that deal with processes, as well as those that report significant observations, are welcome. In the area of biology, studies involving coupling between ecological and physical processes are preferred over those that report systematics. Authors benefit from thorough reviews of their manuscripts, where an attempt is made to maximize clarity. The time between submission and publication is kept to a minimum; there is no page charge.
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