A study on the vertical profile of bacterial DNA structure in the Puruogangri (Tibetan Plateau) ice core using denaturing gradient gel electrophoresis

Authors: Zhang, Xinfang; Yao, Tandong; An, Lizhe; Tian, Lide; Xu, Shijian

Source: Annals of Glaciology, Volume 43, Number 1, September 2006 , pp. 160-166(7)

Publisher: International Glaciological Society

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Abstract:

The bacterial DNA structures at different depths in the Puruogangri (Tibetan Plateau) ice core (83.45 m) were investigated by the denaturing gradient gel electrophoresis (DGGE) DNA fingerprinting technique. DGGE profiles indicated that the bacterial species diversity in glacial ice is high, and indigenous species represented by common bands in all samples may grow on the glacial surface. Bacterial diversity, as estimated by Shannon indices (mean 2.91; SD 0.25; n = 13), was comparable to that of soil habitats and had a positive correlation with Ca2+ concentration (R = 0.71; P < 0.01), a good proxy of dust. This suggested that the soil ecosystem was the main source of bacteria in this glacier. The low similarity indices (0-43%) were found between the ice-core samples, which corresponded to the episodic deposition under defined climatic conditions and low activity of microorganisms in glacial ice. The profiles of bacterial species composition in glacial ice may be a bioindicator of climatic changes or dating.

Document Type: Research article

DOI: http://dx.doi.org/10.3189/172756406781811934

Publication date: 2006-09-01

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  • The Annals of Glaciology is a peer-reviewed, thematic journal published 2 to 4 times a year by the International Glaciological Society (IGS). Publication frequency is determined and volume/issue numbers assigned by the IGS Council on a year-to-year basis and with a lead time of 3 to 4 years. The Annals of Glaciology is included in the ISI Science Citation Index from volume 50, number 50 onwards.

    Themes can be on any aspect of the study of snow and ice. Individual members can make a suggestion for a theme for an Annals issue to the Secretary General, who will forward it to the IGS Publications Committee. The IGS Publication Committee will make a recommendation for an individual themed Annals issue, together with a potential Annals Chief Editor for that issue, to IGS Council. The IGS Council will make the decision whether to proceed, taking into account the spread of topics and the overall capacity for publication of pages in Annals.

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