Simulating tick distributions over sub-Saharan Africa: the use of observed and simulated climate surfaces

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Abstract:

Abstract Aim

A broad suit of climate data sets is becoming available for use in predictive species modelling. We compare the efficacy of using interpolated climate surfaces [Center for Resource and Environmental Studies (CRES) and Climate Research Unit (CRU)] or high-resolution model-derived climate data [Division of Atmospheric Research limited-area model (DARLAM)] for predictive species modelling, using tick distributions from sub-Saharan Africa. Location

The analysis is restricted to sub-Saharan Africa. The study area was subdivided into 3000 grids cells with a resolution of 60 × 60 km. Methods

Species distributions were predicted using an established multivariate climate envelope modelling approach and three very different climate data sets. The recorded variance in the climate data sets was quantified by employing omnidirectional variograms. To further compare the interpolated tick distributions that flowed from using three climate data sets, we calculated true positive (TP) predictions, false negative (FN) predictions as well as the proportional overlaps between observed and modelled tick distributions. In addition, the effect of tick data set size on the performance of the climate data sets was evaluated by performing random draws of known tick distribution records without replacement. Results

The predicted distributions were consistently wider ranging than the known records when using any of the three climate data sets. However, the proportional overlap between predicted and known distributions varied as follows: for Rhipicephalus appendiculatus Neumann (Acari: Ixodidae), these were 60%, 60% and 70%; for Rhipicephalus longus Neumann (Acari: Ixodidae) 60%, 57% and 75%; for Rhipicephalus zambeziensis Walker, Norval & Corwin (Acari: Ixodidae) 57%, 51% and 62%, and for Rhipicephalus capensis Koch (Acari: Ixodidae) 70%, 60% and 60% using the CRES, CRU and DARLAM climate data sets, respectively. All data sets were sensitive to data size but DARLAM performed better when using smaller species data sets. At a 20% data subsample level, DARLAM was able to capture more than 50% of the known records and captured more than 60% of known records at higher subsample levels. Main conclusions

The use of data derived from high-resolution nested climate models (e.g. DARLAM) provided equal or even better species distribution modelling performance. As the model is dynamic and process based, the output data are available at the modelled resolution, and are not hamstrung by the sampling intensity of observed climate data sets (c. one sample per 30,000 km2 for Africa). In addition, when exploring the biodiversity consequences of climate change, these modelled outputs form a more useful basis for comparison with modelled future climate scenarios.

Keywords: Africa; Climate data sets; distribution modelling; ticks

Document Type: Research Article

DOI: http://dx.doi.org/10.1046/j.1365-2699.2003.00913.x

Affiliations: 1: Conservation Planning Unit, Department of Zoology and Entomology, University of Pretoria, Pretoria, 2: LRAM, Department of Geography, Geoinformatics and Meteorology, University of Pretoria, Pretoria, and

Publication date: August 1, 2003

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