Environmental Microbiology

The quest for biofuels fuels genome sequencing
pp. 2471-2475(5)
Author: Galperin, Michael Y.

Iron availability affects mcyD expression and microcystin-LR synthesis in Microcystis aeruginosa PCC7806
pp. 2476-2483(8)
Authors: Sevilla, Emma; Martin-Luna, Beatriz; Vela, Laura; Bes, M. Teresa; Fillat, Maria F.; Peleato, M. Luisa

Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method
pp. 2484-2496(13)
Authors: Gordon, David M.; Clermont, Olivier; Tolley, Heather; Denamur, Erick

Host-specificity of environmentally transmitted Mycoplasma-like isopod symbionts
pp. 2497-2504(8)
Authors: Fraune, Sebastian; Zimmer, Martin

Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells
pp. 2505-2514(10)
Authors: Nevin, K. P.; Richter, H.; Covalla, S. F.; Johnson, J. P.; Woodard, T. L.; Orloff, A. L.; Jia, H.; Zhang, M.; Lovley, D. R.

Development and evaluation of a quantitative real-time PCR assay for the detection of saltwater Bacteriovorax
pp. 2515-2526(12)
Authors: Zheng, Guili; Wang, Cynthia; Williams, Henry N.; Pineiro, Silvia A.

Fingerprinting the genetic diversity of the biotin carboxylase gene (accC) in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark
pp. 2527-2536(10)
Authors: Auguet, Jean-Christophe; Borrego, Carles M.; Bañeras, Lluís; Casamayor, Emilio O.

High beta diversity of bacteria in the shallow terrestrial subsurface
pp. 2537-2549(13)
Authors: Wang, Jianjun; Wu, Yucheng; Jiang, Hongchen; Li, Chunhai; Dong, Hailiang; Wu, Qinglong; Soininen, Janne; Shen, Ji

The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum)
pp. 2550-2573(24)
Authors: Pierce, Elizabeth; Xie, Gary; Barabote, Ravi D.; Saunders, Elizabeth; Han, Cliff S.; Detter, John C.; Richardson, Paul; Brettin, Thomas S.; Das, Amaresh; Ljungdahl, Lars G.; Ragsdale, Stephen W.

A large gene cluster encoding peptide synthetases and polyketide synthases is involved in production of siderophores and oxidative stress response in the cyanobacterium Anabaena sp. strain PCC 7120
pp. 2574-2585(12)
Authors: Jeanjean, Robert; Talla, Emmanuel; Latifi, Amel; Havaux, Michel; Janicki, Annick; Zhang, Cheng-Cai

Inverse nickel-responsive regulation of two urease enzymes in the gastric pathogen Helicobacter mustelae
pp. 2586-2597(12)
Authors: Stoof, Jeroen; Breijer, Simone; Pot, Raymond G. J.; van der Neut, Daan; Kuipers, Ernst J.; Kusters, Johannes G.; van Vliet, Arnoud H. M.

Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics
pp. 2598-2608(11)
Authors: Reischer, G. H.; Haider, J. M.; Sommer, R.; Stadler, H.; Keiblinger, K. M.; Hornek, R.; Zerobin, W.; Mach, R. L.; Farnleitner, A. H.

Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands
pp. 2609-2622(14)
Authors: Chen, Yin; Dumont, Marc G.; Neufeld, Josh D.; Bodrossy, Levente; Stralis-Pavese, Nancy; McNamara, Niall P.; Ostle, Nick; Briones, Maria J. I.; Murrell, J. Colin

Epibiotic bacteria associated with the recently discovered Yeti crab, Kiwa hirsuta
pp. 2623-2634(12)
Authors: Goffredi, Shana K.; Jones, William J.; Erhlich, Hermann; Springer, Armin; Vrijenhoek, Robert C.

Diversification of unicellular eukaryotes: cryptomonad colonizations of marine and fresh waters inferred from revised 18S rRNA phylogeny
pp. 2635-2644(10)
Authors: Shalchian-Tabrizi, Kamran; Bråte, Jon; Logares, Ramiro; Klaveness, Dag; Berney, Cédric; Jakobsen, Kjetill S.

Identity and abundance of active sulfate-reducing bacteria in deep tidal flat sediments determined by directed cultivation and CARD-FISH analysis
pp. 2645-2658(14)
Authors: Gittel, Antje; Mußmann, Marc; Sass, Henrik; Cypionka, Heribert; Könneke, Martin

How natural infection by Nosema ceranae causes honeybee colony collapse
pp. 2659-2669(11)
Authors: Higes, Mariano; Martín-Hernández, Raquel; Botías, Cristina; Bailón, Encarna Garrido; González-Porto, Amelia V.; Barrios, Laura; del Nozal, M. Jesús; Bernal, José L.; Jiménez, Juan J.; Palencia, Pilar García; Meana, Aránzazu

Enrichment of a dioxin-dehalogenating Dehalococcoides species in two-liquid phase cultures
pp. 2670-2683(14)
Authors: Bunge, Michael; Wagner, Anke; Fischer, Marco; Andreesen, Jan R.; Lechner, Ute

Enriching plant microbiota for a metagenomic library construction
pp. 2684-2691(8)
Authors: Wang, Hao-Xin; Geng, Zhao-Liang; Zeng, Ying; Shen, Yue-Mao

Environmental distribution and population biology of Candidatus Accumulibacter, a primary agent of biological phosphorus removal
pp. 2692-2703(12)
Authors: Peterson, S. Brook; Warnecke, Falk; Madejska, Julita; McMahon, Katherine D.; Hugenholtz, Philip

Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean plankton
pp. 2704-2717(14)
Authors: Quaiser, Achim; López-García, Purificación; Zivanovic, Yvan; Henn, Matthew R.; Rodriguez-Valera, Francisco; Moreira, David

Increased susceptibility of white spot syndrome virus-infected Litopenaeus vannamei to Vibrio campbellii
pp. 2718-2727(10)
Authors: Phuoc, L. H.; Corteel, M.; Nauwynck, H. J.; Pensaert, M. B.; Alday-Sanz, V.; Van den Broeck, W.; Sorgeloos, P.; Bossier, P.

Biodiversity of amoebae and amoebae-resisting bacteria in a drinking water treatment plant
pp. 2728-2745(18)
Authors: Thomas, Vincent; Loret, Jean-François; Jousset, Michel; Greub, Gilbert

Differential pathogenicity and genetic diversity among Pectobacterium carotovorum ssp. carotovorum isolates from monocot and dicot hosts support early genomic divergence within this taxon
pp. 2746-2759(14)
Authors: Yishay, Moran; Burdman, Saul; Valverde, Angel; Luzzatto, Tal; Ophir, Ron; Yedidia, Iris

Colonization of overlaying water by bacteria from dry river sediments
pp. 2760-2772(13)
Authors: Fazi, Stefano; Amalfitano, Stefano; Piccini, Claudia; Zoppini, Annamaria; Puddu, Alberto; Pernthaler, Jakob

Burkholderia cenocepacia strains isolated from cystic fibrosis patients are apparently more invasive and more virulent than rhizosphere strains
pp. 2773-2784(12)
Authors: Pirone, Luisa; Bragonzi, Alessandra; Farcomeni, Alessio; Paroni, Moira; Auriche, Cristina; Conese, Massimo; Chiarini, Luigi; Dalmastri, Claudia; Bevivino, Annamaria; Ascenzioni, Fiorentina

The Mth60 fimbriae of Methanothermobacter thermoautotrophicus are functional adhesins
pp. 2785-2795(11)
Authors: Thoma, Christine; Frank, Monika; Rachel, Reinhard; Schmid, Silvia; Näther, Daniela; Wanner, Gerhard; Wirth, Reinhard

The identification of response regulator-specific binding sites reveals new roles of two-component systems in Bacillus cereus and closely related low-GC Gram-positives
pp. 2796-2809(14)
Authors: de Been, Mark; Bart, Marieke J.; Abee, Tjakko; Siezen, Roland J.; Francke, Christof

Portal protein diversity and phage ecology
pp. 2810-2823(14)
Authors: Sullivan, Matthew B.; Coleman, Maureen L.; Quinlivan, Vanessa; Rosenkrantz, Jessica E.; DeFrancesco, Alicia S.; Tan, G.; Fu, Ross; Lee, Jessica A.; Waterbury, John B.; Bielawski, Joseph P.; Chisholm, Sallie W.

The microbial community of Vetiver root and its involvement into essential oil biogenesis
pp. 2824-2841(18)
Authors: Del Giudice, Luigi; Massardo, Domenica Rita; Pontieri, Paola; Bertea, Cinzia M.; Mombello, Domenico; Carata, Elisabetta; Tredici, Salvatore Maurizio; Talà, Adelfia; Mucciarelli, Marco; Groudeva, Veneta Ivanova; De Stefano, Mario; Vigliotta, Giovanni; Maffei, Massimo E.; Alifano, Pietro

Identification and analysis of four candidate symbiosis genes from `Chlorochromatium aggregatum', a highly developed bacterial symbiosis
pp. 2842-2856(15)
Authors: Vogl, Kajetan; Wenter, Roland; Dreßen, Martina; Schlickenrieder, Martina; Plöscher, Matthias; Eichacker, Lutz; Overmann, Jörg

Structural and functional patterns of bacterial communities in response to protist predation along an experimental productivity gradient
pp. 2857-2871(15)
Authors: Corno, Gianluca; Jürgens, Klaus

Systematic evaluation of single mismatch stability predictors for fluorescence in situ hybridization
pp. 2872-2885(14)
Authors: Yilmaz, L. Safak; Bergsven, Lindsey I.; Noguera, Daniel R.

ColRS two-component system prevents lysis of subpopulation of glucose-grown Pseudomonas putida
pp. 2886-2893(8)
Authors: Putrinš, Marta; Ilves, Heili; Kivisaar, Maia; Hõrak, Rita

probeCheck - a central resource for evaluating oligonucleotide probe coverage and specificity
pp. 2894-2898(5)
Authors: Loy, Alexander; Arnold, Roland; Tischler, Patrick; Rattei, Thomas; Wagner, Michael; Horn, Matthias

Quorum sensing: An annotated selection of World Wide Web sites relevant to the topics in Environmental Microbiology
pp. 2899-2900(2)

Fluorescence in situ hybridization analysis of hindgut bacteria associated with the development of equine laminitis
pp. 2901-2901(1)
Authors: Milinovich, Gabriel J.; Trott, Darren J.; Burrell, Paul C.; Croser, Emma L.; Al Jassim, Rafat A. M.; Morton, John M.; van Eps, Andrew W.; Pollitt, Christopher C.