Modeling The Hierarchical Protein Folding Using Clustering Monte-Carlo Algorithm

Authors: Yesylevskyy S.O.; Demchenko A.P.

Source: Protein and Peptide Letters, Volume 8, Number 6, December 2001 , pp. 437-442(6)

Publisher: Bentham Science Publishers

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Abstract:

A new modification of Monte-Carlo algorithm was suggested for the simulation of hierarchical protein folding. When applied to 2D lattice model of 12-member peptide this method allows observing complex kinetic folding behavior with the formation of clustered intermediates.

Keywords: HIERARCHICAL PROTEIN FOLDING; CLUSTERING MONTE-CARLO ALGORITHM; protein folding; Monte-Carlo simulations; lattice models; hierarchical cluster formation

Language: English

Document Type: Review article

DOI: 10.2174/0929866013409166

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