Applied Bioinformatics

Assessing the Reliability of Amplified RNA Used in Microarrays: A DUMB Table Approach
pp. 67-76(10)
Authors: Bearden, Edward D.; Simpson, Pippa M.; Peterson, Charlotte A.; Beggs, Marjorie L.

Machine Learning for Detecting Gene-Gene Interactions: A Review
pp. 77-88(12)
Authors: McKinney, Brett A.; Reif, David M.; Ritchie, Marylyn D.; Moore, Jason H.

RefSeq Refinements of UniGene-Based Gene Matching Improve the Correlation of Expression Measurements Between Two Microarray Platforms
pp. 89-98(10)
Authors: Ji, Yuan; Coombes, Kevin; Zhang, Jiexin; Wen, Sijin; Mitchell, James; Pusztai, Lajos; Symmans, W. Fraser; Wang, Jing

MultiPrimer: Software for Multiplex Primer Design
pp. 99-109(11)
Authors: Lee, Chungnan; Wu, Jain-Shing; Shiue, Yow-Ling; Liang, Hong-Long

MPID-T: Database for Sequence-Structure-Function Information on T-Cell Receptor/Peptide/MHC Interactions
pp. 111-114(4)
Authors: Joo Chuan Tong,; Kong, Lesheng; Tin Wee Tan,; Ranganathan, Shoba

RAMEDIS: The Rare Metabolic Diseases Database
pp. 115-118(4)
Authors: Töpel, Thoralf; Hofestädt, Ralf; Scheible, Dagmar; Trefz, Friedrich

EasyExonPrimer: Automated Primer Design for Exon Sequences
pp. 119-120(2)
Authors: Wu, Xiaolin; Munroe, David J.

OligoMatcher: Analysis and Selection of Specific Oligonucleotide Sequences for Gene Silencing by Antisense or siRNA
pp. 121-124(4)
Authors: Mamidipalli, SudhaRani; Palakal, Mathew; Li, Shuyu

WebaCGH: An Interactive Online Tool for the Analysis and Display of Array Comparative Genomic Hybridisation Data
pp. 125-130(6)
Authors: Frankenberger, Casey; Wu, Xiaolin; Harmon, Jerry; Church, Deanna; Gangi, Lisa M.; Munroe, David J.; Urzúa, Ulises